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```#+ summary: Summarize QTLs extracted from articles. #+ tags: #+ - Summarize QTLs PREFIX rdf: PREFIX dcterms: PREFIX dcmitype: PREFIX faldo: PREFIX so: PREFIX QTL: SELECT (CONCAT('NCBITaxon:', REPLACE(STR(?taxon_uri), '.+_', '')) AS ?taxon_id) (COUNT(DISTINCT ?pmcid) AS ?n_articles) (COUNT(?qtl) AS ?n_qtls) (COUNT(?loc) AS ?n_qtls_with_loc) FROM WHERE { ?dts a dcmitype:Dataset ; so:genome_of ?taxon_uri ; dcterms:hasPart ?qtl . ?qtl a QTL: ; dcterms:isReferencedBy ?pmcid . OPTIONAL { ?qtl faldo:location ?loc } } GROUP BY ?taxon_uri ```

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  • ```#+ summary: Summarize QTLs extracted from articles. #+ tags: #+ - Summarize QTLs PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> PREFIX dcterms: <http://purl.org/dc/terms/> PREFIX dcmitype: <http://purl.org/dc/dcmitype/> PREFIX faldo: <http://biohackathon.org/resource/faldo#> PREFIX so: <http://purl.obolibrary.org/obo/so#> PREFIX QTL: <http://purl.obolibrary.org/obo/SO_0000771> SELECT (CONCAT('NCBITaxon:', REPLACE(STR(?taxon_uri), '.+_', '')) AS ?taxon_id) (COUNT(DISTINCT ?pmcid) AS ?n_articles) (COUNT(?qtl) AS ?n_qtls) (COUNT(?loc) AS ?n_qtls_with_loc) FROM <http://europepmc.org> WHERE { ?dts a dcmitype:Dataset ; so:genome_of ?taxon_uri ; dcterms:hasPart ?qtl . ?qtl a QTL: ; dcterms:isReferencedBy ?pmcid . OPTIONAL { ?qtl faldo:location ?loc } } GROUP BY ?taxon_uri ```
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  • Summarize QTLs extracted from articles.
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